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第 57 卷第 1 期 陈 青,等:核糖体肽中的环芳基交联 131
下,在两个芳香环之间形成交联 。 crosslinking in RiPP biosynthesis[J]. Nat Chem Biol, 2025,
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RiPP 天然产物中的环芳基交联常发生在惰性
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原子间,并且在化学上往往极具挑战。不断涌现的 ing of previously crystallized pyruvate formate-lyase activating
环芳基交联 RiPP 以其多样性和复杂性展示了生命 enzyme reveals insights into SAM binding and reductive cleav-
体系的巨大合成潜力。尽管 rSAM 酶和 P450 酶 age[J]. J Biol Chem, 2023, 299(6): 104791.
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在生命体系中无处不在,大量其他类型(与环芳基 chemistry by radical SAM-RiPP enzymes[J]. Curr Opin Chem
交联 RiPP 无关)的 rSAM 酶和 P450 酶的机制已被 Biol, 2024, 81: 102483.
解析,darobactin 等产物的交联机制也已有初步研 [8] Horitani M, Shisler K, Broderick WE, et al. Radical SAM catal-
ysis via an organometallic intermediate with an Fe-[5'-C]-de-
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入的机制研究,以及在此基础上的酶改造,这两类 ical initiation in the radical SAM enzyme superfamily[J]. Annu
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功能强大的酶有望应用于更多惰性分子的交联,为
[10] Feng J, Mo J, Hemu X. Expanding molecular diversity of ribo-
新型生物催化剂和新型药物分子的开发提供有力 somally synthesized and post-translationally modified peptide
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目前环芳基交联 RiPP 的研究仍面临着诸多挑
Chin J Nat Med, 2025, 23(3): 257-268.
战。例如,酶结构与功能关系解析的不足,未来,仍 [11] Grell TAJ, Goldman PJ, Drennan CL. SPASM and twitch do-
需借助酶-底物复合物的结构解析或预测,结合酶或 mains in S-adenosylmethionine (SAM) radical enzymes[J]. J
Biol Chem, 2015, 290(7): 3964-3971.
前体肽关键残基的突变研究,深入解析酶结构与功
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能的关系。此外,多酶协同的机制仍未明确,仍需 Biochim Biophys Acta Proteins Proteom, 2018, 1866(1): 141-
通过更深入的体内、体外实验进一步验证。对于环 154.
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芳基交联产物的生物活性方面,虽然 darobactin 和
atypical atropisomerism in a small-molecule natural product,
dynobactin 展示出较强的抗菌活性与独特的作用机 tryptorubin A[J]. Science, 2020, 367(6476): 458-463.
制,但绝大多数环芳基交联 RiPP 的功能和活性尚 [14] Kunakom S, Otani H, Udwary DW, et al. Cytochromes P450 in-
volved in bacterial RiPP biosyntheses[J]. J Ind Microbiol
未得到阐明。未来仍需注重真实产物的获取,如在
Biotechnol, 2023, 50(1): kuad005.
原宿主菌中原位激活 BGC,或在近缘物种中异源表 [15] Nguy AKL, Martinie RJ, Cai A, et al. Detection of a kinetically
达获得成熟产物;同时,还需拓展活性测试范围,包 competent compound-I intermediate in the vancomycin biosyn-
括抗细菌、抗真菌、抗肿瘤、抗病毒、免疫抑制等。 thetic enzyme OxyB[J]. J Am Chem Soc, 2024, 146(29): 19629-
19634.
考虑到环芳基交联 RiPP 的多样性和分布的广泛 [16] Belin P, Le Du MH, Fielding A, et al. Identification and struc-
性,可以期待,随着未来更多该类产物的不断涌现, tural basis of the reaction catalyzed by CYP121, an essential cy-
以及活性和机制研究的逐渐深入,环芳基交联 tochrome P450 in Mycobacterium tuberculosis[J]. Proc Natl
Acad Sci USA, 2009, 106(18): 7426-7431.
RiPP 有望成为活性天然产物新的宝库。 [17] Peter Guengerich F. Mechanisms of cytochrome P450-cat-
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